WormBase Tree Display for Variation: WBVar01627300
expand all nodes | collapse all nodes | view schema
WBVar01627300 | Name | Public_name | WBVar01627300 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00308079 | |||||||
CE20789:p.Arg172= | ||||||||
F43G6.8.1:c.514C>A | ||||||||
HGVSg | CHROMOSOME_II:g.11812700G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F43G6 | ||||
Flanking_sequences | GCTGCTCGGCCAACTCGAGCATCTTCTTCC | ATAGAACGTTGTTCGTTTTCTCTCAGTCTC | ||||||
Mapping_target | F43G6 | |||||||
Source_location | 225 | CHROMOSOME_II | 11812637 | 11812637 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009660 | ||||||
Transcript | F43G6.8.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F43G6.8.1:c.514C>A | |||||||
HGVSp | CE20789:p.Arg172= | |||||||
cDNA_position | 578 | |||||||
CDS_position | 514 | |||||||
Protein_position | 172 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | Cgg/Agg | |||||||
Amino_acid_change | R | |||||||
Method | WGS_Flibotte |