WormBase Tree Display for Variation: WBVar01619371
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WBVar01619371 | Name | Public_name | WBVar01619371 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00298991 | |||||||
T01B6.3a.1:c.970-12C>T | ||||||||
CE33821:p.Leu2= | ||||||||
T01B6.3b.1:c.4C>T | ||||||||
HGVSg | CHROMOSOME_X:g.2315851G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | T01B6 | ||||
Flanking_sequences | TCGTGGTATTCAAGCCGATCTGAAATATTA | CATCAGTTATTTTTCTGGAAGTGTTTATTT | ||||||
Mapping_target | T01B6 | |||||||
Source_location | 225 | CHROMOSOME_X | 2315843 | 2315843 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00020135 | ||||||
Transcript | T01B6.3a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T01B6.3a.1:c.970-12C>T | |||||||
Intron_number | 10/12 | |||||||
T01B6.3b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T01B6.3b.1:c.4C>T | |||||||
HGVSp | CE33821:p.Leu2= | |||||||
cDNA_position | 459 | |||||||
CDS_position | 4 | |||||||
Protein_position | 2 | |||||||
Exon_number | 2/4 | |||||||
Codon_change | Cta/Tta | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |