WormBase Tree Display for Variation: WBVar01616285

WBVar01616285 Name: Public_name: WBVar01616285
    Other_name: cewivar00295772
      W08A12.1e.1:c.67-1237T>C
      W08A12.1b.3:c.142-1237T>C
      CE30205:p.Ser98Pro
      W08A12.1d.1:c.244T>C
      W08A12.1b.2:c.142-1237T>C
      W08A12.1a.1:c.292T>C
      W08A12.1b.1:c.142-1237T>C
      W08A12.1c.1:c.124-1237T>C
      CE14696:p.Ser82Pro
    HGVSg: CHROMOSOME_V:g.3696215T>C
  Sequence_details: SMap: S_parent: Sequence: W08A12
    Flanking_sequences: GTGTCACCGGTGAAAACGACGTGTAGCCGA CAGTGTCACTGGAGAGAAAGGTACTTCTGA
    Mapping_target: W08A12
    Source_location: 225 CHROMOSOME_V 3696202 3696202 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006622 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006637 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
      WBStrain00022930 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00021078
    Transcript: W08A12.1b.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1b.3:c.142-1237T>C
        Intron_number: 3/7
      W08A12.1a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: W08A12.1a.1:c.292T>C
        HGVSp: CE30205:p.Ser98Pro
        cDNA_position: 337
        CDS_position: 292
        Protein_position: 98
        Exon_number: 3/8
        Codon_change: Tca/Cca
        Amino_acid_change: S/P
      W08A12.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1c.1:c.124-1237T>C
        Intron_number: 3/7
      W08A12.1b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1b.2:c.142-1237T>C
        Intron_number: 4/8
      W08A12.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1b.1:c.142-1237T>C
        Intron_number: 4/8
      W08A12.1d.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: W08A12.1d.1:c.244T>C
        HGVSp: CE14696:p.Ser82Pro
        cDNA_position: 244
        CDS_position: 244
        Protein_position: 82
        Exon_number: 1/6
        Codon_change: Tca/Cca
        Amino_acid_change: S/P
      W08A12.1e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: W08A12.1e.1:c.67-1237T>C
        Intron_number: 1/4
  Method: WGS_Flibotte