WormBase Tree Display for Variation: WBVar01609080
expand all nodes | collapse all nodes | view schema
WBVar01609080 | Name | Public_name | WBVar01609080 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00288237 | |||||||
C34H4.3b.1:c.340+4G>A | ||||||||
C34H4.3a.1:c.340+4G>A | ||||||||
C34H4.3c.1:c.340+4G>A | ||||||||
HGVSg | CHROMOSOME_IV:g.1551522G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C34H4 | ||||
Flanking_sequences | ATGTAACAACTGCAGCTCAGGCTAATGGTA | TTTTGAACCGATTTTTCAAGGAAAAAACTG | ||||||
Mapping_target | C34H4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 1551521 | 1551521 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00044073 | ||||||
Transcript | C34H4.3c.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C34H4.3c.1:c.340+4G>A | |||||||
Intron_number | 3/4 | |||||||
C34H4.3b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34H4.3b.1:c.340+4G>A | |||||||
Intron_number | 3/4 | |||||||
C34H4.3a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C34H4.3a.1:c.340+4G>A | |||||||
Intron_number | 4/9 | |||||||
Method | WGS_Flibotte |