WormBase Tree Display for Variation: WBVar01602525
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WBVar01602525 | Name | Public_name | WBVar01602525 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00277261 | |||||||
T04C10.11.1:c.142-7T>A | ||||||||
T04C10.11.2:c.142-7T>A | ||||||||
T04C10.4.1:c.-71T>A | ||||||||
HGVSg | CHROMOSOME_X:g.14810612A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | T04C10 | ||||
Flanking_sequences | TCAACAAACACAGCACGTGATTTCCTGGAA | GGATCATTGTTTAAACTAATTATTAATCAA | ||||||
Mapping_target | T04C10 | |||||||
Source_location | 225 | CHROMOSOME_X | 14810543 | 14810543 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00303075 | ||||||
WBGene00000221 | ||||||||
Transcript | T04C10.11.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T04C10.11.1:c.142-7T>A | |||||||
Intron_number | 2/4 | |||||||
T04C10.4.1 | VEP_consequence | 5_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T04C10.4.1:c.-71T>A | |||||||
cDNA_position | 192 | |||||||
Exon_number | 1/5 | |||||||
T04C10.11.2 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T04C10.11.2:c.142-7T>A | |||||||
Intron_number | 2/3 | |||||||
Method | WGS_Flibotte |