WormBase Tree Display for Variation: WBVar01584410
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WBVar01584410 | Name | Public_name | WBVar01584410 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00221374 | |||||||
CE35919:p.Val728= | ||||||||
CE50722:p.Val48= | ||||||||
Y50D4C.4c.1:c.144C>A | ||||||||
Y50D4C.4b.1:c.1050C>A | ||||||||
Y50D4C.4a.1:c.2184C>A | ||||||||
CE50778:p.Val350= | ||||||||
HGVSg | CHROMOSOME_V:g.951842G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y50D4C | ||||
Flanking_sequences | ATCATCGGGTGACGATGGGGAGATGATGTC | ACGAAGAAATTGGAACAGGTCGTCAGGTTG | ||||||
Mapping_target | Y50D4C | |||||||
Source_location | 225 | CHROMOSOME_V | 951843 | 951843 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00005024 | ||||||
Transcript | Y50D4C.4b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y50D4C.4b.1:c.1050C>A | |||||||
HGVSp | CE50778:p.Val350= | |||||||
cDNA_position | 1050 | |||||||
CDS_position | 1050 | |||||||
Protein_position | 350 | |||||||
Exon_number | 4/4 | |||||||
Codon_change | gtC/gtA | |||||||
Amino_acid_change | V | |||||||
Y50D4C.4c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y50D4C.4c.1:c.144C>A | |||||||
HGVSp | CE50722:p.Val48= | |||||||
cDNA_position | 144 | |||||||
CDS_position | 144 | |||||||
Protein_position | 48 | |||||||
Exon_number | 2/2 | |||||||
Codon_change | gtC/gtA | |||||||
Amino_acid_change | V | |||||||
Y50D4C.4a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y50D4C.4a.1:c.2184C>A | |||||||
HGVSp | CE35919:p.Val728= | |||||||
cDNA_position | 2196 | |||||||
CDS_position | 2184 | |||||||
Protein_position | 728 | |||||||
Exon_number | 8/9 | |||||||
Codon_change | gtC/gtA | |||||||
Amino_acid_change | V | |||||||
Method | WGS_Flibotte |