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WormBase Tree Display for Variation: WBVar01580493

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Name Class

WBVar01580493NamePublic_nameWBVar01580493
Other_namecewivar00203444
Y54G2A.6a.1:c.510A>T
CE48649:p.Ala71=
Y54G2A.6b.1:c.213A>T
CE27494:p.Ala170=
HGVSgCHROMOSOME_IV:g.2855087A>T
Sequence_detailsSMapS_parentSequenceY54G2A
Flanking_sequencesCTACCCGGTGTCTTACCCAGTCTCCGGAGCACAGAATACCCAGCTTCTTCCATGACCGAC
Mapping_targetY54G2A
Source_location225CHROMOSOME_IV28550852855085From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
Strain (17)
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00021872
TranscriptY54G2A.6b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.6b.1:c.213A>T
HGVSpCE48649:p.Ala71=
cDNA_position213
CDS_position213
Protein_position71
Exon_number2/2
Codon_changegcA/gcT
Amino_acid_changeA
Y54G2A.6a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY54G2A.6a.1:c.510A>T
HGVSpCE27494:p.Ala170=
cDNA_position1065
CDS_position510
Protein_position170
Exon_number6/7
Codon_changegcA/gcT
Amino_acid_changeA
MethodWGS_Flibotte