WormBase Tree Display for Variation: WBVar01573291

WBVar01573291 Name: Public_name: WBVar01573291
    Other_name: cewivar00159907
      Y15E3A.9:n.41G>T
      Y15E3A.1a.3:c.357-1200C>A
      Y15E3A.1a.4:c.357-1200C>A
      Y15E3A.1b.2:c.-204-1200C>A
      Y15E3A.1a.2:c.357-1200C>A
      Y15E3A.1a.1:c.357-1200C>A
    HGVSg: CHROMOSOME_X:g.15311463C>A
  Sequence_details: SMap: S_parent: Sequence: Y15E3A
    Flanking_sequences: GGCCGCTCCTCCCCATCTTACTCGCTGCCC ACCTCTCATTTCTGATGACCACGACCCAAT
    Mapping_target: Y15E3A
    Source_location: 225 CHROMOSOME_X 15311394 15311394 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00003681
      WBGene00199938
    Transcript: Y15E3A.1a.4 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y15E3A.1a.4:c.357-1200C>A
        Intron_number: 4/10
      Y15E3A.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y15E3A.1a.2:c.357-1200C>A
        Intron_number: 4/10
      Y15E3A.9 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: Y15E3A.9:n.41G>T
        cDNA_position: 41
        Exon_number: 1/1
      Y15E3A.1b.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y15E3A.1b.2:c.-204-1200C>A
        Intron_number: 3/9
      Y15E3A.1a.3 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y15E3A.1a.3:c.357-1200C>A
        Intron_number: 4/10
      Y15E3A.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y15E3A.1a.1:c.357-1200C>A
        Intron_number: 4/10
  Method: WGS_Flibotte