WormBase Tree Display for Variation: WBVar01566053
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WBVar01566053 | Name | Public_name | WBVar01566053 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00149835 | |||||||
Y55D5A.5c.1:c.65-1786A>G | ||||||||
Y55D5A.5a.1:c.65-1786A>G | ||||||||
HGVSg | CHROMOSOME_III:g.3024960T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
Flanking_sequences | TTGTGAGCGAATTTTGAGGAAATTTTATGA | AATCAAGAAAATTCCTACCATTAAATGATG | ||||||
Mapping_target | Y55D5A | |||||||
Source_location | 225 | CHROMOSOME_III | 3024952 | 3024952 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000898 | ||||||
Transcript | Y55D5A.5a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5a.1:c.65-1786A>G | |||||||
Intron_number | 2/18 | |||||||
Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5c.1:c.65-1786A>G | |||||||
Intron_number | 3/20 | |||||||
Method | WGS_Flibotte |