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WormBase Tree Display for Variation: WBVar01566022

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Name Class

WBVar01566022NamePublic_nameWBVar01566022
Other_namecewivar00149797
Y55D5A.5c.1:c.2772-459C>T
Y55D5A.5f.1:c.341+927C>T
Y55D5A.5d.1:c.2630+927C>T
Y55D5A.5e.1:c.2543+927C>T
Y55D5A.5a.1:c.2771+927C>T
HGVSgCHROMOSOME_III:g.3007683G>A
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesATTGCCGGAATTGAATATTGAAAATTTCCGCAAATCGGGAAATTGCCGTAATCTAAATTT
Mapping_targetY55D5A
Source_location225CHROMOSOME_III30076753007675From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.2543+927C>T
Intron_number9/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.341+927C>T
Intron_number2/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.2771+927C>T
Intron_number12/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.2772-459C>T
Intron_number13/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.2630+927C>T
Intron_number10/15
MethodWGS_Flibotte