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WormBase Tree Display for Variation: WBVar01561591

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Name Class

WBVar01561591NamePublic_nameWBVar01561591
Other_namecewivar00142181
Y48C3A.5d.1:c.504+3459A>C
Y48C3A.5a.1:c.639+3459A>C
Y48C3A.5b.1:c.639+3459A>C
Y48C3A.4b.1:c.248-133T>G
Y48C3A.4a.1:c.239-133T>G
HGVSgCHROMOSOME_II:g.13283227A>C
Sequence_detailsSMapS_parentSequenceY48C3A
Flanking_sequencesTTTTTCCTATACGCGTGACTGAATATATTTAAAAATGTTTCAAATTTTGGTAATTTTCCA
Mapping_targetY48C3A
Source_location225CHROMOSOME_II1328315713283157From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012989
WBGene00012988
TranscriptY48C3A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5d.1:c.504+3459A>C
Intron_number4/9
Y48C3A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.4b.1:c.248-133T>G
Intron_number3/6
Y48C3A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5b.1:c.639+3459A>C
Intron_number4/11
Y48C3A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5a.1:c.639+3459A>C
Intron_number4/10
Y48C3A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.4a.1:c.239-133T>G
Intron_number3/6
MethodWGS_Flibotte