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WormBase Tree Display for Variation: WBVar01561590

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Name Class

WBVar01561590NamePublic_nameWBVar01561590
Other_namecewivar00142180
Y48C3A.5d.1:c.504+3252T>A
Y48C3A.4a.1:c.313A>T
Y48C3A.5b.1:c.639+3252T>A
CE22135:p.Thr105Ser
Y48C3A.4b.1:c.322A>T
Y48C3A.5a.1:c.639+3252T>A
CE54249:p.Thr108Ser
HGVSgCHROMOSOME_II:g.13283020T>A
Sequence_detailsSMapS_parentSequenceY48C3A
Flanking_sequencesGTGTTGGAGTTGGGAGGCTTGTTGGTACGGAGGTGAGAATAATGGAAGGGAGGGGAAGGT
Mapping_targetY48C3A
Source_location225CHROMOSOME_II1328295013282950From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00012989
WBGene00012988
TranscriptY48C3A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5d.1:c.504+3252T>A
Intron_number4/9
Y48C3A.4b.1 (12)
Y48C3A.5b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5b.1:c.639+3252T>A
Intron_number4/11
Y48C3A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48C3A.5a.1:c.639+3252T>A
Intron_number4/10
Y48C3A.4a.1 (12)
MethodWGS_Flibotte