WormBase Tree Display for Variation: WBVar01553250
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WBVar01553250 | Name | Public_name | WBVar01553250 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00130541 | |||||||
Y15E3A.1a.1:c.1319+120T>C | ||||||||
Y15E3A.1b.2:c.827+120T>C | ||||||||
Y15E3A.1a.4:c.1319+120T>C | ||||||||
Y15E3A.1a.3:c.1319+120T>C | ||||||||
Y15E3A.1a.2:c.1319+120T>C | ||||||||
Y15E3A.1b.1:c.827+120T>C | ||||||||
HGVSg | CHROMOSOME_X:g.15314188T>C | |||||||
Sequence_details | SMap | S_parent | Sequence | Y15E3A | ||||
Flanking_sequences | ATTTTTAATTGCTTATTCATATCCGTAAAA | TTGCTAAGTTGGCAAAAGTGAATAGTTTTC | ||||||
Mapping_target | Y15E3A | |||||||
Source_location | 225 | CHROMOSOME_X | 15314119 | 15314119 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00003681 | ||||||
Transcript | Y15E3A.1a.4 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1a.4:c.1319+120T>C | |||||||
Intron_number | 9/10 | |||||||
Y15E3A.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1b.1:c.827+120T>C | |||||||
Intron_number | 6/7 | |||||||
Y15E3A.1a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1a.2:c.1319+120T>C | |||||||
Intron_number | 9/10 | |||||||
Y15E3A.1b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1b.2:c.827+120T>C | |||||||
Intron_number | 8/9 | |||||||
Y15E3A.1a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1a.3:c.1319+120T>C | |||||||
Intron_number | 9/10 | |||||||
Y15E3A.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y15E3A.1a.1:c.1319+120T>C | |||||||
Intron_number | 9/10 | |||||||
Method | WGS_Flibotte |