WormBase Tree Display for Variation: WBVar01544459
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WBVar01544459 | Name | Public_name | WBVar01544459 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00115306 | |||||||
F56B6.2e.1:c.452+1345C>T | ||||||||
F56B6.2j.1:c.1946+1345C>T | ||||||||
F56B6.2b.1:c.1826+1345C>T | ||||||||
F56B6.2i.1:c.1943+1345C>T | ||||||||
F56B6.2h.1:c.1952+1345C>T | ||||||||
F56B6.2a.1:c.1937+1345C>T | ||||||||
F56B6.2c.1:c.752+1345C>T | ||||||||
HGVSg | CHROMOSOME_X:g.3554271C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F56B6 | ||||
Flanking_sequences | CACTCGCCCCCTTCTTGAAGCCACTGCCGC | CCGCGGCCCCCTTGCATTTTCTGCCATTGT | ||||||
Mapping_target | F56B6 | |||||||
Source_location | 225 | CHROMOSOME_X | 3554258 | 3554258 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004350 | ||||||
Transcript | F56B6.2j.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2j.1:c.1946+1345C>T | |||||||
Intron_number | 11/14 | |||||||
F56B6.2e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2e.1:c.452+1345C>T | |||||||
Intron_number | 3/7 | |||||||
F56B6.2i.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2i.1:c.1943+1345C>T | |||||||
Intron_number | 12/16 | |||||||
F56B6.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2b.1:c.1826+1345C>T | |||||||
Intron_number | 11/15 | |||||||
F56B6.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2a.1:c.1937+1345C>T | |||||||
Intron_number | 12/16 | |||||||
F56B6.2h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2h.1:c.1952+1345C>T | |||||||
Intron_number | 12/16 | |||||||
F56B6.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F56B6.2c.1:c.752+1345C>T | |||||||
Intron_number | 6/9 | |||||||
Method | WGS_Flibotte |