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WormBase Tree Display for Variation: WBVar01541293

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Name Class

WBVar01541293NamePublic_nameWBVar01541293
Other_namecewivar00104689
Y55D5A.5f.1:c.59-83G>C
Y55D5A.5e.1:c.2261-83G>C
Y55D5A.5a.1:c.2489-83G>C
Y55D5A.5c.1:c.2489-83G>C
Y55D5A.5d.1:c.2348-83G>C
HGVSgCHROMOSOME_III:g.3008975C>G
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesCACCTTTTTCCTCACGAGGGACGAGGAAAAGTGGTTTCTAGGCCATGGCCAGGGGCCGACAAGTTTCAGCGGCCATTTATCTTGCTTTGTTTTCCGCGTA
Mapping_targetY55D5A
Source_location225CHROMOSOME_III30089673008967From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionCG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.2261-83G>C
Intron_number8/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.59-83G>C
Intron_number1/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.2489-83G>C
Intron_number11/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.2489-83G>C
Intron_number12/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.2348-83G>C
Intron_number9/15
MethodWGS_Flibotte