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WormBase Tree Display for Variation: WBVar01541282

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Name Class

WBVar01541282NamePublic_nameWBVar01541282
Other_namecewivar00104669
Y55D5A.5e.1:c.3224+803T>A
Y55D5A.5a.1:c.3452+803T>A
Y55D5A.5c.1:c.3698+803T>A
Y55D5A.5f.1:c.1022+803T>A
Y55D5A.5d.1:c.3311+803T>A
HGVSgCHROMOSOME_III:g.3003763A>T
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesGATATTCTGTGAAAAATATCAAAACACTGCACTTTTTCCTCACGAGGGACGAGGCAAAAAGGTTTCTAGGCCATGGCCGAGGGGCCGACA
Mapping_targetY55D5A
Source_location225CHROMOSOME_III30037553003755From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00000034From_analysisMillion_mutation_project_reanalysis
WBStrain00004599From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.3224+803T>A
Intron_number11/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.1022+803T>A
Intron_number4/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.3452+803T>A
Intron_number14/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.3698+803T>A
Intron_number16/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.3311+803T>A
Intron_number12/15
MethodWGS_Flibotte