WormBase Tree Display for Variation: WBVar01541280
expand all nodes | collapse all nodes | view schema
WBVar01541280 | Name | Public_name | WBVar01541280 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00104655 | |||||||
Y55D5A.5f.1:c.3016-486G>C | ||||||||
Y55D5A.5c.1:c.5692-486G>C | ||||||||
Y55D5A.5d.1:c.5305-486G>C | ||||||||
Y55D5A.5e.1:c.5218-486G>C | ||||||||
Y55D5A.5a.1:c.5446-486G>C | ||||||||
Y55D5A.5g.1:c.1924-486G>C | ||||||||
HGVSg | CHROMOSOME_III:g.2996500C>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y55D5A | ||||
Flanking_sequences | CAGACTATTTTCAAGATTTTTTCGAAATTT | CCAATGTCCGGGGTAATTTTTTCAGATTTT | ||||||
Mapping_target | Y55D5A | |||||||
Source_location | 225 | CHROMOSOME_III | 2996492 | 2996492 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (18) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000898 | ||||||
Transcript | Y55D5A.5g.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5g.1:c.1924-486G>C | |||||||
Intron_number | 3/3 | |||||||
Y55D5A.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5e.1:c.5218-486G>C | |||||||
Intron_number | 14/14 | |||||||
Y55D5A.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5f.1:c.3016-486G>C | |||||||
Intron_number | 7/7 | |||||||
Y55D5A.5a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5a.1:c.5446-486G>C | |||||||
Intron_number | 17/18 | |||||||
Y55D5A.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5c.1:c.5692-486G>C | |||||||
Intron_number | 19/20 | |||||||
Y55D5A.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y55D5A.5d.1:c.5305-486G>C | |||||||
Intron_number | 15/15 | |||||||
Method | WGS_Flibotte |