WormBase Tree Display for Variation: WBVar01540475
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WBVar01540475 | Name | Public_name | WBVar01540475 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00102496 | |||||||
Y46E12BL.2a.1:c.594C>T | ||||||||
Y46E12BL.2a.2:c.594C>T | ||||||||
CE27472:p.Leu198= | ||||||||
HGVSg | CHROMOSOME_II:g.15235651C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y46E12BL | ||||
Flanking_sequences | CAATAATTTGCAGATTCTCTACACAAAACT | CTAGAAAACGTCGATAGCACCGAAGGATCC | ||||||
Mapping_target | Y46E12BL | |||||||
Source_location | 225 | CHROMOSOME_II | 15235575 | 15235575 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023665 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021595 | ||||||
Transcript | Y46E12BL.2a.2 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y46E12BL.2a.2:c.594C>T | |||||||
HGVSp | CE27472:p.Leu198= | |||||||
cDNA_position | 676 | |||||||
CDS_position | 594 | |||||||
Protein_position | 198 | |||||||
Exon_number | 7/12 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Y46E12BL.2a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y46E12BL.2a.1:c.594C>T | |||||||
HGVSp | CE27472:p.Leu198= | |||||||
cDNA_position | 603 | |||||||
CDS_position | 594 | |||||||
Protein_position | 198 | |||||||
Exon_number | 6/11 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |