WormBase Tree Display for Variation: WBVar01537088
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WBVar01537088 | Name | Public_name | WBVar01537088 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00087358 | |||||||
CE42889:p.Cys45= | ||||||||
ZC239.14.1:c.135C>T | ||||||||
HGVSg | CHROMOSOME_II:g.3221832G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | ZC239 | ||||
Flanking_sequences | GAAATGTTTCGGGGAGCGATCAATAAAAAT | CATCCAGATTCGTCGAGTTTCAGCTGAAAT | ||||||
Mapping_target | ZC239 | |||||||
Source_location | 225 | CHROMOSOME_II | 3221835 | 3221835 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (15) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022572 | ||||||
Transcript | ZC239.14.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | ZC239.14.1:c.135C>T | |||||||
HGVSp | CE42889:p.Cys45= | |||||||
cDNA_position | 159 | |||||||
CDS_position | 135 | |||||||
Protein_position | 45 | |||||||
Exon_number | 3/6 | |||||||
Codon_change | tgC/tgT | |||||||
Amino_acid_change | C | |||||||
Method | WGS_Flibotte |