WormBase Tree Display for Variation: WBVar01504070
expand all nodes | collapse all nodes | view schema
WBVar01504070 | Name | Public_name | WBVar01504070 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00008460 | |||||||
ZC239.14.1:c.529G>T | ||||||||
CE42889:p.Ala177Ser | ||||||||
HGVSg | CHROMOSOME_II:g.3221341C>A | |||||||
Sequence_details | SMap | S_parent | Sequence | ZC239 | ||||
Flanking_sequences | GCGTCACTATCCTTGCAGTCCACCCAAGAG | AGGTGAAACGTGTTCCTCTTTAAATAATCA | ||||||
Mapping_target | ZC239 | |||||||
Source_location | 225 | CHROMOSOME_II | 3221344 | 3221344 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (22) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00022572 | ||||||
Transcript | ZC239.14.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | ZC239.14.1:c.529G>T | |||||||
HGVSp | CE42889:p.Ala177Ser | |||||||
cDNA_position | 553 | |||||||
CDS_position | 529 | |||||||
Protein_position | 177 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | Gct/Tct | |||||||
Amino_acid_change | A/S | |||||||
Method | WGS_Flibotte |