WormBase Tree Display for Variation: WBVar01502105
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WBVar01502105 | Name | Public_name | WBVar01502105 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00003414 | |||||||
W04A8.4a.1:c.168G>A | ||||||||
W04A8.4a.2:c.168G>A | ||||||||
CE50181:p.Thr56= | ||||||||
HGVSg | CHROMOSOME_I:g.13842394C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | W04A8 | ||||
Flanking_sequences | TCTCAGTTGGTCTCCACGTAGATGAGTGTT | GTCCAATCGGACATAGTCTCGCCCTTGTGG | ||||||
Mapping_target | W04A8 | |||||||
Source_location | 225 | CHROMOSOME_I | 13842382 | 13842382 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00000032 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012239 | ||||||
Transcript | W04A8.4a.2 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | W04A8.4a.2:c.168G>A | |||||||
HGVSp | CE50181:p.Thr56= | |||||||
cDNA_position | 686 | |||||||
CDS_position | 168 | |||||||
Protein_position | 56 | |||||||
Exon_number | 3/6 | |||||||
Codon_change | acG/acA | |||||||
Amino_acid_change | T | |||||||
W04A8.4a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | W04A8.4a.1:c.168G>A | |||||||
HGVSp | CE50181:p.Thr56= | |||||||
cDNA_position | 1603 | |||||||
CDS_position | 168 | |||||||
Protein_position | 56 | |||||||
Exon_number | 2/5 | |||||||
Codon_change | acG/acA | |||||||
Amino_acid_change | T | |||||||
Method | WGS_Flibotte |