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WormBase Tree Display for Variation: WBVar01468313

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Name Class

WBVar01468313EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01468313
Other_nameF56B6.2j.1:c.1706-416G>A
F56B6.2a.1:c.1697-416G>A
F56B6.2h.1:c.1712-416G>A
F56B6.2b.1:c.1586-416G>A
F56B6.2i.1:c.1703-416G>A
F56B6.2c.1:c.512-416G>A
F56B6.2e.1:c.212-416G>A
HGVSgCHROMOSOME_X:g.3552131G>A
Sequence_detailsSMapS_parentSequenceF56B6
Flanking_sequencesAAAATGACTCGGAATTCAAAAATAAAATTTAAAACATTATAATATACACGTTTTTATGAG
Mapping_targetF56B6
Type_of_mutationSubstitutionga
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193353615
dbSNP_ssss295529534
StatusLive
AffectsGeneWBGene00004350
TranscriptF56B6.2j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2j.1:c.1706-416G>A
Intron_number9/14
F56B6.2e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2e.1:c.212-416G>A
Intron_number1/7
F56B6.2i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2i.1:c.1703-416G>A
Intron_number10/16
F56B6.2b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2b.1:c.1586-416G>A
Intron_number9/15
F56B6.2a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2a.1:c.1697-416G>A
Intron_number10/16
F56B6.2h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2h.1:c.1712-416G>A
Intron_number10/16
F56B6.2c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF56B6.2c.1:c.512-416G>A
Intron_number4/9
ReferenceWBPaper00040707
MethodWGS_Andersen