WormBase Tree Display for Variation: WBVar01461859
expand all nodes | collapse all nodes | view schema
WBVar01461859 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01461859 | ||||
Other_name | B0240.1.1:c.1260G>T | |||||
CE05172:p.Pro420= | ||||||
HGVSg | CHROMOSOME_V:g.11728283C>A | |||||
Sequence_details | SMap | S_parent | Sequence | B0240 | ||
Flanking_sequences | AGATTGTGCATAATAATTCATTTCACCATG | GGGAAATCGGGATCATCAACTTGATTCCAT | ||||
Mapping_target | B0240 | |||||
Type_of_mutation | Substitution | c | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193347515 | ||
dbSNP_ss | ss | 295523434 | ||||
Status | Live | |||||
Affects | Gene | WBGene00004359 | ||||
Transcript | B0240.1.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | B0240.1.1:c.1260G>T | |||||
HGVSp | CE05172:p.Pro420= | |||||
cDNA_position | 1261 | |||||
CDS_position | 1260 | |||||
Protein_position | 420 | |||||
Exon_number | 11/13 | |||||
Codon_change | ccG/ccT | |||||
Amino_acid_change | P | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |