WormBase Tree Display for Variation: WBVar01456708
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WBVar01456708 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01456708 | ||||
Other_name | cewivar00312536 | |||||
Y51H4A.7.2:c.127-117C>T | ||||||
Y51H4A.7.1:c.127-117C>T | ||||||
HGVSg | CHROMOSOME_IV:g.16541513G>A | |||||
Sequence_details | SMap | S_parent | Sequence | Y51H4A | ||
Flanking_sequences | AGTAAGTGAAACAGACTTTTGTAACTAATA | CCAACAGCTTTTCAGCTCCTAAATTAAAAT | ||||
Mapping_target | Y51H4A | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00006616 | From_analysis | WGS_Andersen | |||
WBStrain00006618 | From_analysis | WGS_Andersen | ||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193342365 | ||
dbSNP_ss | ss | 295518284 | ||||
Status | Live | |||||
Affects | Gene | WBGene00013103 | ||||
Transcript | Y51H4A.7.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | Y51H4A.7.2:c.127-117C>T | |||||
Intron_number | 2/10 | |||||
Y51H4A.7.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | Y51H4A.7.1:c.127-117C>T | |||||
Intron_number | 3/11 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |