WormBase Tree Display for Variation: WBVar01454581
expand all nodes | collapse all nodes | view schema
WBVar01454581 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01454581 | ||||
Other_name | cewivar00573096 | |||||
CE49849:p.Gly59= | ||||||
C25G4.17.1:c.177A>G | ||||||
HGVSg | CHROMOSOME_IV:g.12442319A>G | |||||
Sequence_details | SMap | S_parent | Sequence | C25G4 | ||
Flanking_sequences | TACTGGAATGTGTGCCAAGATGCAAGTTGG | GCCCGATTGGCGTCTCTTCGTGATGAAGAT | ||||
Mapping_target | C25G4 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
WBStrain00023084 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193340238 | ||
dbSNP_ss | ss | 295516157 | ||||
Status | Live | |||||
Affects | Gene | WBGene00255469 | ||||
Transcript | C25G4.17.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | C25G4.17.1:c.177A>G | |||||
HGVSp | CE49849:p.Gly59= | |||||
cDNA_position | 258 | |||||
CDS_position | 177 | |||||
Protein_position | 59 | |||||
Exon_number | 3/5 | |||||
Codon_change | ggA/ggG | |||||
Amino_acid_change | G | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |