WormBase Tree Display for Variation: WBVar01454417
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WBVar01454417 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01454417 | ||||
Other_name | ZK617.1f.1:c.1747-388A>G | |||||
ZK617.1c.1:c.130-388A>G | ||||||
ZK617.1g.1:c.1747-388A>G | ||||||
ZK617.1h.1:c.1747-388A>G | ||||||
ZK617.1b.1:c.1747-388A>G | ||||||
ZK617.1i.1:c.1747-388A>G | ||||||
ZK617.1d.1:c.586-388A>G | ||||||
ZK617.1a.1:c.1747-388A>G | ||||||
HGVSg | CHROMOSOME_IV:g.11997251T>C | |||||
Sequence_details | SMap | S_parent | Sequence | ZK617 | ||
Flanking_sequences | TATTTTAAATTTAGATAGTTCCTGAAATTT | ATAAATTTCAATTTTTGTTTAAATTTGGGT | ||||
Mapping_target | ZK617 | |||||
Type_of_mutation | Substitution | t | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (51) | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193340074 | ||
dbSNP_ss | ss | 295515993 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006759 | ||||
Transcript | ZK617.1i.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1i.1:c.1747-388A>G | |||||
Intron_number | 11/32 | |||||
ZK617.1a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1a.1:c.1747-388A>G | |||||
Intron_number | 12/32 | |||||
ZK617.1g.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1g.1:c.1747-388A>G | |||||
Intron_number | 11/31 | |||||
ZK617.1f.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1f.1:c.1747-388A>G | |||||
Intron_number | 11/30 | |||||
ZK617.1d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1d.1:c.586-388A>G | |||||
Intron_number | 2/21 | |||||
ZK617.1c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1c.1:c.130-388A>G | |||||
Intron_number | 3/25 | |||||
ZK617.1h.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1h.1:c.1747-388A>G | |||||
Intron_number | 11/33 | |||||
ZK617.1b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | ZK617.1b.1:c.1747-388A>G | |||||
Intron_number | 11/33 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |