WormBase Tree Display for Variation: WBVar01454406

WBVar01454406 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01454406
    Other_name (18)
    HGVSg: CHROMOSOME_IV:g.11978511T>C
  Sequence_details: SMap: S_parent: Sequence: ZK617
    Flanking_sequences: AGAGTCATTGGAAACGGTGTACTCGTAACG CCGGCTTCTCTCACTGATAAGGCTGGAATT
    Mapping_target: ZK617
    Type_of_mutation: Substitution: t c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023075 From_analysis: WGS_Andersen
      WBStrain00023079 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193340063
        dbSNP_ss ss 295515982
    Status: Live
  Affects: Gene: WBGene00006759
    Transcript: ZK617.1i.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1i.1:c.17010A>G
        HGVSp: CE49956:p.Gly5670=
        cDNA_position: 17010
        CDS_position: 17010
        Protein_position: 5670
        Exon_number: 29/33
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1a.1:c.16128A>G
        HGVSp: CE33017:p.Gly5376=
        cDNA_position: 16255
        CDS_position: 16128
        Protein_position: 5376
        Exon_number: 28/33
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1g.1:c.16155A>G
        HGVSp: CE46868:p.Gly5385=
        cDNA_position: 16155
        CDS_position: 16155
        Protein_position: 5385
        Exon_number: 28/32
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1f.1:c.16392A>G
        HGVSp: CE46948:p.Gly5464=
        cDNA_position: 16392
        CDS_position: 16392
        Protein_position: 5464
        Exon_number: 27/31
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1d.1:c.14967A>G
        HGVSp: CE49926:p.Gly4989=
        cDNA_position: 14967
        CDS_position: 14967
        Protein_position: 4989
        Exon_number: 18/22
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1c.1:c.15468A>G
        HGVSp: CE47057:p.Gly5156=
        cDNA_position: 15729
        CDS_position: 15468
        Protein_position: 5156
        Exon_number: 22/26
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1h.1:c.17037A>G
        HGVSp: CE49973:p.Gly5679=
        cDNA_position: 17037
        CDS_position: 17037
        Protein_position: 5679
        Exon_number: 30/34
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1b.1:c.17085A>G
        HGVSp: CE33018:p.Gly5695=
        cDNA_position: 17085
        CDS_position: 17085
        Protein_position: 5695
        Exon_number: 30/34
        Codon_change: ggA/ggG
        Amino_acid_change: G
      ZK617.1e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK617.1e.1:c.14916A>G
        HGVSp: CE44668:p.Gly4972=
        cDNA_position: 14916
        CDS_position: 14916
        Protein_position: 4972
        Exon_number: 17/21
        Codon_change: ggA/ggG
        Amino_acid_change: G
  Reference: WBPaper00040707
  Method: WGS_Andersen