WormBase Tree Display for Variation: WBVar01454367
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WBVar01454367 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01454367 | ||||
Other_name | cewivar00572218 | |||||
C29E6.1b.1:c.801G>A | ||||||
CE37323:p.Gln267= | ||||||
C29E6.1a.1:c.801G>A | ||||||
CE05332:p.Gln267= | ||||||
CE40548:p.Gln267= | ||||||
C29E6.1c.1:c.801G>A | ||||||
HGVSg | CHROMOSOME_IV:g.11886936G>A | |||||
Sequence_details | SMap | S_parent | Sequence | C29E6 | ||
Flanking_sequences | CACTGAATTCGATCACTTTTTCCCATATCA | ACTGTCAGCAAGAACTGTTCGGATTCTATT | ||||
Mapping_target | C29E6 | |||||
Type_of_mutation | Substitution | g | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
WBStrain00023084 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193340024 | ||
dbSNP_ss | ss | 295515943 | ||||
Status | Live | |||||
Affects | Gene | WBGene00002827 | ||||
Transcript | C29E6.1b.1 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | |||||
HGVSc | C29E6.1b.1:c.801G>A | |||||
HGVSp | CE37323:p.Gln267= | |||||
cDNA_position | 806 | |||||
CDS_position | 801 | |||||
Protein_position | 267 | |||||
Exon_number | 5/11 | |||||
Codon_change | caG/caA | |||||
Amino_acid_change | Q | |||||
C29E6.1a.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | C29E6.1a.1:c.801G>A | |||||
HGVSp | CE40548:p.Gln267= | |||||
cDNA_position | 804 | |||||
CDS_position | 801 | |||||
Protein_position | 267 | |||||
Exon_number | 5/12 | |||||
Codon_change | caG/caA | |||||
Amino_acid_change | Q | |||||
C29E6.1c.1 | VEP_consequence | synonymous_variant | ||||
VEP_impact | LOW | |||||
HGVSc | C29E6.1c.1:c.801G>A | |||||
HGVSp | CE05332:p.Gln267= | |||||
cDNA_position | 801 | |||||
CDS_position | 801 | |||||
Protein_position | 267 | |||||
Exon_number | 4/10 | |||||
Codon_change | caG/caA | |||||
Amino_acid_change | Q | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |