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WormBase Tree Display for Variation: WBVar01453913

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Name Class

WBVar01453913EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01453913
Other_nameK11E8.1r.1:c.107-2735T>C
K11E8.1g.1:c.-224-2735T>C
K11E8.1h.1:c.-224-2735T>C
K11E8.1b.1:c.-224-2735T>C
K11E8.1f.1:c.-224-2735T>C
K11E8.1e.1:c.-224-2735T>C
K11E8.1d.2:c.-224-2735T>C
HGVSgCHROMOSOME_IV:g.10343291A>G
Sequence_detailsSMapS_parentSequenceY43C5B
Flanking_sequencesATTTAATTTTTGATAGAGAGTGTTTGATAATTATTGATATACAAAAATTACAGAAAGTTG
Mapping_targetY43C5B
Type_of_mutationSubstitutionag
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193339570
dbSNP_ssss295515489
StatusLive
AffectsGeneWBGene00006779
TranscriptK11E8.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11E8.1b.1:c.-224-2735T>C
Intron_number1/6
K11E8.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11E8.1f.1:c.-224-2735T>C
Intron_number1/18
K11E8.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11E8.1e.1:c.-224-2735T>C
Intron_number1/18
K11E8.1h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11E8.1h.1:c.-224-2735T>C
Intron_number1/19
K11E8.1g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11E8.1g.1:c.-224-2735T>C
Intron_number1/18
K11E8.1d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11E8.1d.2:c.-224-2735T>C
Intron_number1/17
K11E8.1r.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK11E8.1r.1:c.107-2735T>C
Intron_number2/18
ReferenceWBPaper00040707
MethodWGS_Andersen