WormBase Tree Display for Variation: WBVar01452170

WBVar01452170 Evidence: Paper_evidence: WBPaper00040707
  Name: Public_name: WBVar01452170
    Other_name: CE48730:p.Phe255=
      CE43124:p.Phe268=
      W03B1.7c.5:c.138T>C
      W03B1.7a.1:c.804T>C
      W03B1.7c.4:c.138T>C
      W03B1.7c.2:c.138T>C
      W03B1.7b.1:c.765T>C
      CE48657:p.Phe46=
      W03B1.7c.1:c.138T>C
      W03B1.7c.3:c.138T>C
    HGVSg: CHROMOSOME_IV:g.4338759T>C
  Sequence_details: SMap: S_parent: Sequence: W03B1
    Flanking_sequences: ATCCTATTTTTCTTTGGCTGCATTGCTATT ATCACTGCTTTCCCGTACACTCTGAAAGCA
    Mapping_target: W03B1
    Type_of_mutation: Substitution: t c
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004601 From_analysis: WGS_Andersen
      WBStrain00031286 From_analysis: WGS_Andersen
      WBStrain00031301 From_analysis: WGS_Andersen
    Laboratory: QX
    Person: WBPerson1730
    Analysis: WGS_Andersen
    DB_info: Database: dbSNP_rs rs 193337827
        dbSNP_ss ss 295513746
    Status: Live
  Affects: Gene: WBGene00020976
    Transcript: W03B1.7c.4 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W03B1.7c.4:c.138T>C
        HGVSp: CE48657:p.Phe46=
        cDNA_position: 288
        CDS_position: 138
        Protein_position: 46
        Exon_number: 3/10
        Codon_change: ttT/ttC
        Amino_acid_change: F
      W03B1.7b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W03B1.7b.1:c.765T>C
        HGVSp: CE48730:p.Phe255=
        cDNA_position: 765
        CDS_position: 765
        Protein_position: 255
        Exon_number: 5/11
        Codon_change: ttT/ttC
        Amino_acid_change: F
      W03B1.7c.2 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W03B1.7c.2:c.138T>C
        HGVSp: CE48657:p.Phe46=
        cDNA_position: 863
        CDS_position: 138
        Protein_position: 46
        Exon_number: 4/11
        Codon_change: ttT/ttC
        Amino_acid_change: F
      W03B1.7c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W03B1.7c.1:c.138T>C
        HGVSp: CE48657:p.Phe46=
        cDNA_position: 841
        CDS_position: 138
        Protein_position: 46
        Exon_number: 5/12
        Codon_change: ttT/ttC
        Amino_acid_change: F
      W03B1.7c.5 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W03B1.7c.5:c.138T>C
        HGVSp: CE48657:p.Phe46=
        cDNA_position: 340
        CDS_position: 138
        Protein_position: 46
        Exon_number: 2/8
        Codon_change: ttT/ttC
        Amino_acid_change: F
      W03B1.7a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W03B1.7a.1:c.804T>C
        HGVSp: CE43124:p.Phe268=
        cDNA_position: 811
        CDS_position: 804
        Protein_position: 268
        Exon_number: 5/12
        Codon_change: ttT/ttC
        Amino_acid_change: F
      W03B1.7c.3 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: W03B1.7c.3:c.138T>C
        HGVSp: CE48657:p.Phe46=
        cDNA_position: 715
        CDS_position: 138
        Protein_position: 46
        Exon_number: 3/10
        Codon_change: ttT/ttC
        Amino_acid_change: F
  Reference: WBPaper00040707
  Method: WGS_Andersen