WormBase Tree Display for Variation: WBVar01451542
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WBVar01451542 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar01451542 | |||
Other_name | Y54G2A.1.1:c.163-135A>T | ||||
HGVSg | CHROMOSOME_IV:g.3021721A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y54G2A | |
Flanking_sequences | AGAAAAATAACATTTTTTAAGTAGCGCGAG | GATGAGAATTCGCGAATAACGTGCAATTGG | |||
Mapping_target | Y54G2A | ||||
Type_of_mutation | Substitution | a | t | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004597 | From_analysis | WGS_Andersen | ||
WBStrain00006363 | From_analysis | WGS_Andersen | |||
WBStrain00023311 | From_analysis | WGS_Andersen | |||
WBStrain00033541 | From_analysis | WGS_Andersen | |||
Laboratory | QX | ||||
Person | WBPerson1730 | ||||
Analysis | WGS_Andersen | ||||
DB_info | Database (2) | ||||
Status | Live | ||||
Affects | Gene | WBGene00003008 | |||
Transcript | Y54G2A.1.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y54G2A.1.1:c.163-135A>T | ||||
Intron_number | 3/4 | ||||
Reference | WBPaper00040707 | ||||
Method | WGS_Andersen |