WormBase Tree Display for Variation: WBVar01448128
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WBVar01448128 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01448128 | ||||
Other_name | T21C12.1e.1:c.1345-28T>A | |||||
T21C12.1m.1:c.784-28T>A | ||||||
T21C12.1f.1:c.563-879T>A | ||||||
T21C12.1c.2:c.1288-28T>A | ||||||
T21C12.1k.1:c.1288-28T>A | ||||||
T21C12.1d.1:c.1252-28T>A | ||||||
T21C12.1o.1:c.59-879T>A | ||||||
T21C12.1c.1:c.1288-28T>A | ||||||
HGVSg | CHROMOSOME_III:g.10529707T>A | |||||
Sequence_details | SMap | S_parent | Sequence | T21C12 | ||
Flanking_sequences | TATTTACGACTCCTCTGCAAAACCAAAAAA | AGCCTTTTTTTAATCAATAAATTCCAGGCT | ||||
Mapping_target | T21C12 | |||||
Type_of_mutation | Substitution | t | a | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193334385 | ||
dbSNP_ss | ss | 295510304 | ||||
Status | Live | |||||
Affects | Gene | WBGene00006784 | ||||
Transcript | T21C12.1k.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1k.1:c.1288-28T>A | |||||
Intron_number | 10/11 | |||||
T21C12.1m.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1m.1:c.784-28T>A | |||||
Intron_number | 6/8 | |||||
T21C12.1c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1c.1:c.1288-28T>A | |||||
Intron_number | 11/18 | |||||
T21C12.1e.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1e.1:c.1345-28T>A | |||||
Intron_number | 12/19 | |||||
T21C12.1c.2 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1c.2:c.1288-28T>A | |||||
Intron_number | 11/14 | |||||
T21C12.1o.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1o.1:c.59-879T>A | |||||
Intron_number | 1/5 | |||||
T21C12.1d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1d.1:c.1252-28T>A | |||||
Intron_number | 10/17 | |||||
T21C12.1f.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T21C12.1f.1:c.563-879T>A | |||||
Intron_number | 6/11 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |