WormBase Tree Display for Variation: WBVar01444113
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WBVar01444113 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01444113 | ||||
Other_name | cewivar00549591 | |||||
M01E10.2a.1:c.3654+34C>G | ||||||
M01E10.2b.1:c.2655+34C>G | ||||||
HGVSg | CHROMOSOME_III:g.2037846G>C | |||||
Sequence_details | SMap | S_parent | Sequence | M01E10 | ||
Flanking_sequences | TGGAATTCAATTTTTTACTTAGTTTGCTTT | AAAATTGCGGGAAATTGCTGCAAGCGGGCT | ||||
Mapping_target | M01E10 | |||||
Type_of_mutation | Substitution | g | c | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00022928 | From_analysis | WGS_Andersen | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||
WGS_Andersen | ||||||
WBStrain00023150 | From_analysis | WGS_Andersen | ||||
WBStrain00023211 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | Million_mutation_project_reanalysis | |||||
WGS_Andersen | ||||||
DB_info | Database | dbSNP_rs | rs | 193331274 | ||
dbSNP_ss | ss | 295507193 | ||||
Status | Live | |||||
Affects | Gene | WBGene00001063 | ||||
Transcript | M01E10.2a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | M01E10.2a.1:c.3654+34C>G | |||||
Intron_number | 15/21 | |||||
M01E10.2b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | M01E10.2b.1:c.2655+34C>G | |||||
Intron_number | 10/16 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |