WormBase Tree Display for Variation: WBVar01444109
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WBVar01444109 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01444109 | ||||
Other_name | M01E10.2a.1:c.4106-8T>A | |||||
M01E10.2b.1:c.3107-8T>A | ||||||
HGVSg | CHROMOSOME_III:g.2036094A>T | |||||
Sequence_details | SMap | S_parent | Sequence | M01E10 | ||
Flanking_sequences | AGCCATGTTGCGAGAAAGAATTGCTGAAAA | CATTTTTTTGTCAAAATTTTGAATTCCCGC | ||||
Mapping_target | M01E10 | |||||
Type_of_mutation | Substitution | a | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00005303 | From_analysis | WGS_Andersen | |||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193331270 | ||
dbSNP_ss | ss | 295507189 | ||||
Status | Live | |||||
Affects | Gene | WBGene00001063 | ||||
Transcript | M01E10.2a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | |||||
HGVSc | M01E10.2a.1:c.4106-8T>A | |||||
Intron_number | 19/21 | |||||
M01E10.2b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | |||||
HGVSc | M01E10.2b.1:c.3107-8T>A | |||||
Intron_number | 14/16 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |