WormBase Tree Display for Variation: WBVar01443340
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WBVar01443340 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01443340 | ||||
Other_name | cewivar00469632 | |||||
T24C4.8.1:c.-1578A>G | ||||||
T24C4.4.1:c.373-20T>C | ||||||
HGVSg | CHROMOSOME_III:g.872781A>G | |||||
Sequence_details | SMap | S_parent | Sequence | T24C4 | ||
Flanking_sequences | GAATATCCAAGCTGAAAAGTTAAGCATATT | ATAGGTTCACATGAGATAAATTGAATTTCA | ||||
Mapping_target | T24C4 | |||||
Type_of_mutation | Substitution | a | g | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
WGS_Andersen | ||||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_rs | rs | 193330501 | ||
dbSNP_ss | ss | 295506420 | ||||
Status | Live | |||||
Affects | Gene | WBGene00044681 | ||||
WBGene00020760 | ||||||
Transcript | T24C4.8.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | T24C4.8.1:c.-1578A>G | |||||
cDNA_position | 199 | |||||
Exon_number | 1/6 | |||||
T24C4.4.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | T24C4.4.1:c.373-20T>C | |||||
Intron_number | 4/5 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |