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WormBase Tree Display for Variation: WBVar01438533

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Name Class

WBVar01438533EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01438533
Other_nameF18A1.3i.1:c.66+1042C>T
F18A1.3c.1:c.66+1042C>T
F18A1.3b.1:c.66+1042C>T
F18A1.3l.1:c.66+1042C>T
F18A1.3d.1:c.66+1042C>T
F18A1.3a.1:c.66+1042C>T
HGVSgCHROMOSOME_II:g.7673150C>T
Sequence_detailsSMapS_parentSequenceF18A1
Flanking_sequencesCGATGCTCATTTCGAATTCGACATATATAGTCCTTTTTTCGGTGCTTCTCCTGTACATAA
Mapping_targetF18A1
Type_of_mutationSubstitutionct
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193326594
dbSNP_ssss295502513
StatusLive
AffectsGeneWBGene00003044
TranscriptF18A1.3l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3l.1:c.66+1042C>T
Intron_number2/6
F18A1.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3b.1:c.66+1042C>T
Intron_number2/6
F18A1.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3a.1:c.66+1042C>T
Intron_number2/5
F18A1.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3c.1:c.66+1042C>T
Intron_number2/4
F18A1.3i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3i.1:c.66+1042C>T
Intron_number2/6
F18A1.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3d.1:c.66+1042C>T
Intron_number2/6
ReferenceWBPaper00040707
MethodWGS_Andersen