WormBase Tree Display for Variation: WBVar01438533
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WBVar01438533 | Evidence | Paper_evidence | WBPaper00040707 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01438533 | ||||
Other_name | F18A1.3i.1:c.66+1042C>T | |||||
F18A1.3c.1:c.66+1042C>T | ||||||
F18A1.3b.1:c.66+1042C>T | ||||||
F18A1.3l.1:c.66+1042C>T | ||||||
F18A1.3d.1:c.66+1042C>T | ||||||
F18A1.3a.1:c.66+1042C>T | ||||||
HGVSg | CHROMOSOME_II:g.7673150C>T | |||||
Sequence_details | SMap | S_parent | Sequence | F18A1 | ||
Flanking_sequences | CGATGCTCATTTCGAATTCGACATATATAG | TCCTTTTTTCGGTGCTTCTCCTGTACATAA | ||||
Mapping_target | F18A1 | |||||
Type_of_mutation | Substitution | c | t | |||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00031279 | From_analysis | WGS_Andersen | |||
WBStrain00031284 | From_analysis | WGS_Andersen | ||||
Laboratory | QX | |||||
Person | WBPerson1730 | |||||
Analysis | WGS_Andersen | |||||
DB_info | Database | dbSNP_rs | rs | 193326594 | ||
dbSNP_ss | ss | 295502513 | ||||
Status | Live | |||||
Affects | Gene | WBGene00003044 | ||||
Transcript | F18A1.3l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3l.1:c.66+1042C>T | |||||
Intron_number | 2/6 | |||||
F18A1.3b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3b.1:c.66+1042C>T | |||||
Intron_number | 2/6 | |||||
F18A1.3a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3a.1:c.66+1042C>T | |||||
Intron_number | 2/5 | |||||
F18A1.3c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3c.1:c.66+1042C>T | |||||
Intron_number | 2/4 | |||||
F18A1.3i.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3i.1:c.66+1042C>T | |||||
Intron_number | 2/6 | |||||
F18A1.3d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3d.1:c.66+1042C>T | |||||
Intron_number | 2/6 | |||||
Reference | WBPaper00040707 | |||||
Method | WGS_Andersen |