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WormBase Tree Display for Variation: WBVar01431871

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Name Class

WBVar01431871EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar01431871
Other_nameK04F10.4j.1:c.1972-1861T>A
K04F10.4d.1:c.1971+2491T>A
K04F10.4c.1:c.1971+2491T>A
K04F10.4i.1:c.1972-1547T>A
K04F10.4h.1:c.1972-530T>A
K04F10.4b.1:c.1971+2491T>A
K04F10.4d.2:c.1971+2491T>A
K04F10.4a.1:c.1972-245T>A
HGVSgCHROMOSOME_I:g.6348047T>A
Sequence_detailsSMapS_parentSequenceK04F10
Flanking_sequencesCGTCGTCGTCTTTTTAAATTGGTTCTACGGGTTTTTAATTGTTATTTCACTTGCATGTCG
Mapping_targetK04F10
Type_of_mutationSubstitutionta
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00031279From_analysisWGS_Andersen
WBStrain00031284From_analysisWGS_Andersen
LaboratoryQX
PersonWBPerson1730
AnalysisWGS_Andersen
DB_infoDatabasedbSNP_rsrs193319934
dbSNP_ssss295495851
StatusLive
AffectsGeneWBGene00000254
TranscriptK04F10.4j.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4j.1:c.1972-1861T>A
Intron_number13/14
K04F10.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4d.1:c.1971+2491T>A
Intron_number13/19
K04F10.4h.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4h.1:c.1972-530T>A
Intron_number13/14
K04F10.4d.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4d.2:c.1971+2491T>A
Intron_number12/18
K04F10.4i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4i.1:c.1972-1547T>A
Intron_number11/11
K04F10.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4b.1:c.1971+2491T>A
Intron_number11/12
K04F10.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4c.1:c.1971+2491T>A
Intron_number13/16
K04F10.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScK04F10.4a.1:c.1972-245T>A
Intron_number13/14
ReferenceWBPaper00040707
MethodWGS_Andersen