WormBase Tree Display for Variation: WBVar01431290
expand all nodes | collapse all nodes | view schema
| WBVar01431290 | Evidence | Paper_evidence | WBPaper00040707 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01431290 | ||||
| Other_name | C09D1.1f.1:c.17976-491A>T | |||||
| C09D1.1b.1:c.19896-491A>T | ||||||
| C09D1.1p.1:c.16317-491A>T | ||||||
| C09D1.1g.1:c.18477-491A>T | ||||||
| C09D1.1j.1:c.16557-491A>T | ||||||
| C09D1.1i.1:c.18411-491A>T | ||||||
| C09D1.1n.1:c.17736-491A>T | ||||||
| C09D1.1k.1:c.19830-491A>T | ||||||
| C09D1.1h.1:c.16758-491A>T | ||||||
| C09D1.1m.1:c.18177-491A>T | ||||||
| HGVSg | CHROMOSOME_I:g.4079034A>T | |||||
| Sequence_details | SMap | S_parent | Sequence | C24G7 | ||
| Flanking_sequences | TCGCCCACGGCTCCAATTTTTTTCTGTGTC | TTCTTTTTTGTGTGCTTTCTTTTCTATTTC | ||||
| Mapping_target | C24G7 | |||||
| Type_of_mutation | Substitution | a | t | |||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00006698 | From_analysis | WGS_Andersen | |||
| Laboratory | QX | |||||
| Person | WBPerson1730 | |||||
| Analysis | WGS_Andersen | |||||
| DB_info | Database | dbSNP_rs | rs | 193319353 | ||
| dbSNP_ss | ss | 295495270 | ||||
| Status | Live | |||||
| Affects | Gene | WBGene00006820 | ||||
| Transcript | C09D1.1b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1b.1:c.19896-491A>T | |||||
| Intron_number | 34/48 | |||||
| C09D1.1p.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1p.1:c.16317-491A>T | |||||
| Intron_number | 24/37 | |||||
| C09D1.1j.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1j.1:c.16557-491A>T | |||||
| Intron_number | 23/36 | |||||
| C09D1.1g.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1g.1:c.18477-491A>T | |||||
| Intron_number | 25/38 | |||||
| C09D1.1k.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1k.1:c.19830-491A>T | |||||
| Intron_number | 33/46 | |||||
| C09D1.1i.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1i.1:c.18411-491A>T | |||||
| Intron_number | 24/37 | |||||
| C09D1.1n.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1n.1:c.17736-491A>T | |||||
| Intron_number | 33/46 | |||||
| C09D1.1h.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1h.1:c.16758-491A>T | |||||
| Intron_number | 25/38 | |||||
| C09D1.1f.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1f.1:c.17976-491A>T | |||||
| Intron_number | 32/45 | |||||
| C09D1.1m.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | C09D1.1m.1:c.18177-491A>T | |||||
| Intron_number | 34/47 | |||||
| Reference | WBPaper00040707 | |||||
| Method | WGS_Andersen |
