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WormBase Tree Display for Variation: WBVar01429545

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Name Class

WBVar01429545NamePublic_nametm5848
Other_nameW03G9.7.1:c.248_490del
CE33195:p.Ile84_Tyr164delextTer?
HGVSgCHROMOSOME_I:g.4988635_4988952del
Sequence_detailsSMapS_parentSequenceW03G9
Flanking_sequencesctgtttcctgtcgaaccattgcatcctcgttgatataatcctggaacaaaacacattttc
Mapping_targetW03G9
Source_location7CHROMOSOME_I49886344988953Inferred_automaticallyNational_Bioresource_Project
Type_of_mutationDeletion
PCR_producttm5848_external
tm5848_internal
SeqStatusSequenced
Variation_typeAllele
OriginSpeciesCaenorhabditis elegans
LaboratoryFX
AuthorMitani S
DB_infoDatabaseNational_Bioresource_Projectseq5848
NBP_allele
StatusLive
AffectsGeneWBGene00021017
TranscriptW03G9.7.1 (11)
InteractorWBInteraction000525375
WBInteraction000525376
IsolationMutagenTMP/UV
GeneticsMapI
DescriptionPhenotypeWBPhenotype:0000649Paper_evidenceWBPaper00046900
Curator_confirmedWBPerson44
WBPhenotype:0001414Paper_evidenceWBPaper00046900
Curator_confirmedWBPerson44
WBPhenotype:0002038Paper_evidenceWBPaper00046900
Curator_confirmedWBPerson44
WBPhenotype:0004003Paper_evidenceWBPaper00046900
Curator_confirmedWBPerson44
Phenotype_not_observedWBPhenotype:0000062Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
RemarkClassified as homozygous viable by the National Bioresource Project of Japan.Person_evidenceWBPerson7743
Curator_confirmedWBPerson712
ReferenceWBPaper00046900
Remark34484/34485-34802/34803 (318 bp deletion)
This knockout was generated by the National Bioresource Project, Tokyo, Japan, which is part of the International C. elegans Gene Knockout Consortium, which should be acknowledged in any publications resulting from its use.Paper_evidenceWBPaper00041807
MethodNBP_knockout_allele