WormBase Tree Display for Variation: WBVar01418412
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| WBVar01418412 | Evidence | Paper_evidence | WBPaper00037807 | |||
|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01418412 | ||||
| Other_name | cewivar00680246 | |||||
| B0041.2a.1:c.1135+81del | ||||||
| B0041.2d.1:c.1261+81del | ||||||
| B0041.2a.2:c.1135+81del | ||||||
| B0041.2c.1:c.1135+81del | ||||||
| B0041.2b.1:c.1261+81del | ||||||
| B0041.2e.1:c.1261+81del | ||||||
| B0041.2f.1:c.1261+81del | ||||||
| B0041.2g.1:c.1135+81del | ||||||
| HGVSg | CHROMOSOME_I:g.4656861del | |||||
| Sequence_details | SMap | S_parent | Sequence | B0041 | ||
| Flanking_sequences | TATTTGGTGGTAAAACCATTAATTTATTCGTTTAAAATTAATTATACCAA | TTTTTTGTTGCGTTTTCCGTTTTTTTAAATATTTTTTTACATCGAAATTG | ||||
| Mapping_target | B0041 | |||||
| Type_of_mutation | Deletion | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | |||||
| Variation_type | SNP | |||||
| Natural_variant | ||||||
| Origin | Species | Caenorhabditis elegans | ||||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_De_Bono | ||||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | ||||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||
| Laboratory | AX | |||||
| Analysis | WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | ||||||
| DB_info | Database | dbSNP_ss | ss | 539069365 | ||
| Status | Live | |||||
| Affects | Gene | WBGene00015007 | ||||
| Transcript | B0041.2f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2f.1:c.1261+81del | |||||
| Intron_number | 6/10 | |||||
| B0041.2d.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2d.1:c.1261+81del | |||||
| Intron_number | 5/8 | |||||
| B0041.2c.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2c.1:c.1135+81del | |||||
| Intron_number | 4/8 | |||||
| B0041.2e.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2e.1:c.1261+81del | |||||
| Intron_number | 6/10 | |||||
| B0041.2a.2 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2a.2:c.1135+81del | |||||
| Intron_number | 4/8 | |||||
| B0041.2a.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2a.1:c.1135+81del | |||||
| Intron_number | 6/10 | |||||
| B0041.2g.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2g.1:c.1135+81del | |||||
| Intron_number | 4/8 | |||||
| B0041.2b.1 | VEP_consequence | intron_variant | ||||
| VEP_impact | MODIFIER | |||||
| HGVSc | B0041.2b.1:c.1261+81del | |||||
| Intron_number | 6/10 | |||||
| Reference | WBPaper00037807 | |||||
| Method | WGS_De_Bono |
