WormBase Tree Display for Variation: WBVar01407749
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WBVar01407749 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01407749 | ||||
Other_name | cewivar00673850 | |||||
M01E10.2b.1:c.2809-7dup | ||||||
M01E10.2a.1:c.3808-7dup | ||||||
HGVSg | CHROMOSOME_III:g.2036759_2036760insT | |||||
Sequence_details | SMap | S_parent | Sequence | M01E10 | ||
Flanking_sequences | GTACATAAGGAGAGTTTGCAGACGAATTTTAGAGATTCAGCGTCCTGGAA | TTTTTTTTTCTTAATGCTTTTATTTCCAAAAAATCCTATTTGTCGCCAAT | ||||
Mapping_target | M01E10 | |||||
Type_of_mutation | Insertion | T | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006642 | From_analysis | WGS_De_Bono | ||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539122294 | ||
History | Acquires_merge | WBVar01951618 | ||||
Status | Live | |||||
Affects | Gene | WBGene00001063 | ||||
Transcript | M01E10.2a.1 | VEP_consequence | splice_region_variant,intron_variant | |||
VEP_impact | LOW | |||||
HGVSc | M01E10.2a.1:c.3808-7dup | |||||
Intron_number | 16/21 | |||||
M01E10.2b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||
VEP_impact | LOW | |||||
HGVSc | M01E10.2b.1:c.2809-7dup | |||||
Intron_number | 11/16 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |