WormBase Tree Display for Variation: WBVar01400183
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WBVar01400183 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01400183 | ||||
Other_name | cewivar00654809 | |||||
F18A1.3b.1:c.67-1042_67-1039del | ||||||
F18A1.3c.1:c.67-1042_67-1039del | ||||||
F18A1.3i.1:c.67-1042_67-1039del | ||||||
F18A1.3a.1:c.67-1042_67-1039del | ||||||
F18A1.3l.1:c.67-1042_67-1039del | ||||||
F18A1.3d.1:c.67-1042_67-1039del | ||||||
HGVSg | CHROMOSOME_II:g.7680009_7680012del | |||||
Sequence_details | SMap | S_parent | Sequence | F18A1 | ||
Flanking_sequences | TCATTTTTTTAATCATTTTGGCACGAAAAACGTCACTCTCCTGTCTCGAG | AGTTGACACATTCCTTCATTTATTTTTCACTTCTTGAAATGCAAATTGTT | ||||
Mapping_target | F18A1 | |||||
Type_of_mutation | Deletion | AGTT | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (34) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539195187 | ||
Status | Live | |||||
Affects | Gene | WBGene00003044 | ||||
Transcript | F18A1.3l.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3l.1:c.67-1042_67-1039del | |||||
Intron_number | 2/6 | |||||
F18A1.3b.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3b.1:c.67-1042_67-1039del | |||||
Intron_number | 2/6 | |||||
F18A1.3a.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3a.1:c.67-1042_67-1039del | |||||
Intron_number | 2/5 | |||||
F18A1.3c.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3c.1:c.67-1042_67-1039del | |||||
Intron_number | 2/4 | |||||
F18A1.3i.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3i.1:c.67-1042_67-1039del | |||||
Intron_number | 2/6 | |||||
F18A1.3d.1 | VEP_consequence | intron_variant | ||||
VEP_impact | MODIFIER | |||||
HGVSc | F18A1.3d.1:c.67-1042_67-1039del | |||||
Intron_number | 2/6 | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |