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WormBase Tree Display for Variation: WBVar01400183

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Name Class

WBVar01400183EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar01400183
Other_namecewivar00654809
F18A1.3b.1:c.67-1042_67-1039del
F18A1.3c.1:c.67-1042_67-1039del
F18A1.3i.1:c.67-1042_67-1039del
F18A1.3a.1:c.67-1042_67-1039del
F18A1.3l.1:c.67-1042_67-1039del
F18A1.3d.1:c.67-1042_67-1039del
HGVSgCHROMOSOME_II:g.7680009_7680012del
Sequence_detailsSMapS_parentSequenceF18A1
Flanking_sequencesTCATTTTTTTAATCATTTTGGCACGAAAAACGTCACTCTCCTGTCTCGAGAGTTGACACATTCCTTCATTTATTTTTCACTTCTTGAAATGCAAATTGTT
Mapping_targetF18A1
Type_of_mutationDeletionAGTTPaper_evidenceWBPaper00037807
SeqStatusSequenced
Variation_typeSNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (34)
LaboratoryAX
AnalysisWGS_De_Bono
Million_mutation_project_reanalysis
DB_infoDatabasedbSNP_ssss539195187
StatusLive
AffectsGeneWBGene00003044
TranscriptF18A1.3l.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3l.1:c.67-1042_67-1039del
Intron_number2/6
F18A1.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3b.1:c.67-1042_67-1039del
Intron_number2/6
F18A1.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3a.1:c.67-1042_67-1039del
Intron_number2/5
F18A1.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3c.1:c.67-1042_67-1039del
Intron_number2/4
F18A1.3i.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3i.1:c.67-1042_67-1039del
Intron_number2/6
F18A1.3d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF18A1.3d.1:c.67-1042_67-1039del
Intron_number2/6
ReferenceWBPaper00037807
MethodWGS_De_Bono