WormBase Tree Display for Variation: WBVar01399221
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WBVar01399221 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01399221 | ||||
Other_name | cewivar00720526 | |||||
CE38302:p.Ala67del | ||||||
C54C8.12.1:c.199_201del | ||||||
HGVSg | CHROMOSOME_I:g.12457124_12457126del | |||||
Sequence_details | SMap | S_parent | Sequence | C54C8 | ||
Flanking_sequences | ATCCAAACTTTCAAGTTGACAACGTCCCTGGGGAACGAGCTCGCAGACAT | GGGCCACGTAGATTCTACCGATTCTACCACTCAAATTGGTTTTATTAATT | ||||
Mapping_target | C54C8 | |||||
Type_of_mutation | Deletion | GCA | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (15) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539194322 | ||
Status | Live | |||||
Affects | Gene | WBGene00044242 | ||||
Transcript | C54C8.12.1 | VEP_consequence | inframe_deletion | |||
VEP_impact | MODERATE | |||||
HGVSc | C54C8.12.1:c.199_201del | |||||
HGVSp | CE38302:p.Ala67del | |||||
cDNA_position | 199-201 | |||||
CDS_position | 199-201 | |||||
Protein_position | 67 | |||||
Exon_number | 1/1 | |||||
Codon_change | GCA/- | |||||
Amino_acid_change | A/- | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |