WormBase Tree Display for Variation: WBVar01396952
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WBVar01396952 | Evidence | Paper_evidence | WBPaper00037807 | |||
---|---|---|---|---|---|---|
Name | Public_name | WBVar01396952 | ||||
Other_name | cewivar00674687 | |||||
CE00809:p.Phe12SerfsTer16 | ||||||
ZK418.7.1:c.35del | ||||||
HGVSg | CHROMOSOME_III:g.7080755del | |||||
Sequence_details | SMap | S_parent | Sequence | ZK418 | ||
Flanking_sequences | CGCTCATTCTCCCATCTCCAAACAGAAAATGGACTGCGAAATGAAATCTG | AAAAAAAAAACAAATATATCTTGACTTCCACCATCTCTTACAGTTTTTCC | ||||
Mapping_target | ZK418 | |||||
Type_of_mutation | Deletion | A | Paper_evidence | WBPaper00037807 | ||
SeqStatus | Sequenced | |||||
Variation_type | SNP | |||||
Natural_variant | ||||||
Origin | Species | Caenorhabditis elegans | ||||
Strain (21) | ||||||
Laboratory | AX | |||||
Analysis | WGS_De_Bono | |||||
Million_mutation_project_reanalysis | ||||||
DB_info | Database | dbSNP_ss | ss | 539116052 | ||
Status | Live | |||||
Affects | Gene | WBGene00022736 | ||||
Transcript | ZK418.7.1 | VEP_consequence | frameshift_variant | |||
VEP_impact | HIGH | |||||
HGVSc | ZK418.7.1:c.35del | |||||
HGVSp | CE00809:p.Phe12SerfsTer16 | |||||
cDNA_position | 35 | |||||
CDS_position | 35 | |||||
Protein_position | 12 | |||||
Exon_number | 1/8 | |||||
Codon_change | tTc/tc | |||||
Amino_acid_change | F/X | |||||
Reference | WBPaper00037807 | |||||
Method | WGS_De_Bono |