WormBase Tree Display for Variation: WBVar01396403

WBVar01396403 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01396403
    Other_name: cewivar00738333
      Y55D5A.5c.1:c.983-228del
      Y55D5A.5a.1:c.983-228del
      Y55D5A.5d.1:c.842-228del
      Y55D5A.5e.1:c.755-228del
    HGVSg: CHROMOSOME_III:g.3013806del
  Sequence_details: SMap: S_parent: Sequence: Y55D5A
    Flanking_sequences: AAAATTGCCGGTTTGCCGATTTGCCGGAAAGTTTCAATTTTTCCGAATTG TTTTTTTGTTAAAGGTGGAGTAGAGTCATTTTGAAATTTTGGAATATATA
    Mapping_target: Y55D5A
    Type_of_mutation: Deletion: T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
      WBStrain00006643 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006645 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023138 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539115557
    Status: Live
  Affects: Gene: WBGene00000898
    Transcript: Y55D5A.5e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.5e.1:c.755-228del
        Intron_number: 6/14
      Y55D5A.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.5a.1:c.983-228del
        Intron_number: 9/18
      Y55D5A.5c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.5c.1:c.983-228del
        Intron_number: 10/20
      Y55D5A.5d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y55D5A.5d.1:c.842-228del
        Intron_number: 7/15
  Reference: WBPaper00037807
  Method: WGS_De_Bono