WormBase Tree Display for Variation: WBVar01394872

WBVar01394872 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01394872
    Other_name: Y48C3A.5d.1:c.504+3466del
      Y48C3A.4a.1:c.239-140del
      Y48C3A.4b.1:c.248-140del
      Y48C3A.5b.1:c.639+3466del
      Y48C3A.5a.1:c.639+3466del
    HGVSg: CHROMOSOME_II:g.13283234del
  Sequence_details: SMap: S_parent: Sequence: Y48C3A
    Flanking_sequences: AAATTATTTCATATTTTTCCTATACGCGTGACTGAATATATTTAAAAAAT TTTCAAATTTTGGTAATTTTCCAAAACTTTGGCCAAAAATTTTGTAAATT
    Mapping_target: Y48C3A
    Type_of_mutation: Deletion: G Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00006642 From_analysis: WGS_De_Bono
    Laboratory: AX
    Analysis: WGS_De_Bono
    DB_info: Database: dbSNP_ss ss 539114181
    Status: Live
  Affects: Gene: WBGene00012989
      WBGene00012988
    Transcript: Y48C3A.5d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5d.1:c.504+3466del
        Intron_number: 4/9
      Y48C3A.4b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.4b.1:c.248-140del
        Intron_number: 3/6
      Y48C3A.5b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5b.1:c.639+3466del
        Intron_number: 4/11
      Y48C3A.5a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.5a.1:c.639+3466del
        Intron_number: 4/10
      Y48C3A.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: Y48C3A.4a.1:c.239-140del
        Intron_number: 3/6
  Reference: WBPaper00037807
  Method: WGS_De_Bono