WormBase Tree Display for Variation: WBVar01391783

WBVar01391783 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01391783
    Other_name: cewivar00651013
      C45E1.1c.1:c.164-629del
      C45E1.1b.1:c.145+1017del
      C45E1.1a.2:c.146-629del
      C45E1.1a.1:c.146-629del
    HGVSg: CHROMOSOME_I:g.3105529del
  Sequence_details: SMap: S_parent: Sequence: C45E1
    Flanking_sequences: GATAATTATAAGTTTTTCATACTTTGAGAAGAAAAATGCAAAAAAAAAAA ACAAAAAAAGCGGAGAAAATCTAAAGAAATCGAAAAAAAGAGCGAAAAAT
    Mapping_target: C45E1
    Type_of_mutation: Deletion: T Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00000034 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004599 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006642 From_analysis: WGS_De_Bono
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539111400
    Status: Live
  Affects: Gene: WBGene00003654
    Transcript: C45E1.1b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1b.1:c.145+1017del
        Intron_number: 1/6
      C45E1.1c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1c.1:c.164-629del
        Intron_number: 2/8
      C45E1.1a.2 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1a.2:c.146-629del
        Intron_number: 3/10
      C45E1.1a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C45E1.1a.1:c.146-629del
        Intron_number: 2/9
  Reference: WBPaper00037807
  Method: WGS_De_Bono