WormBase Tree Display for Variation: WBVar01311925

WBVar01311925 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar01311925
    Other_name: cewivar00485878
      CE39469:p.Leu893Ser
      C05D12.3a.1:c.2678T>C
      C05D12.3c.2:c.2678T>C
      C05D12.3c.1:c.2678T>C
      CE36974:p.Leu893Ser
      C05D12.3c.3:c.2678T>C
    HGVSg: CHROMOSOME_II:g.11429783T>C
  Sequence_details: SMap: S_parent: Sequence: C05D12
    Flanking_sequences: TGACACATCTCGATACGACCAACCTATCAGCTATCAGAACACCACCATCT AAGCCGTGACTCTTCCACATGTTCCTACAACTACATTACTCCTCAAATCA
    Mapping_target: C05D12
    Type_of_mutation: Substitution: t C Paper_evidence: WBPaper00037807
    SeqStatus: Sequenced
  Variation_type: SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00022850 From_analysis: Million_mutation_project_reanalysis
          WGS_De_Bono
      WBStrain00022886 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023192 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023286 From_analysis: Million_mutation_project_reanalysis
    Laboratory: AX
    Analysis: WGS_De_Bono
      Million_mutation_project_reanalysis
    DB_info: Database: dbSNP_ss ss 539169012
    Status: Live
  Affects: Gene: WBGene00014666
    Transcript: C05D12.3a.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: C05D12.3a.1:c.2678T>C
        HGVSp: CE36974:p.Leu893Ser
        cDNA_position: 2690
        CDS_position: 2678
        Protein_position: 893
        Exon_number: 14/16
        Codon_change: tTa/tCa
        Amino_acid_change: L/S
      C05D12.3c.1 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: C05D12.3c.1:c.2678T>C
        HGVSp: CE39469:p.Leu893Ser
        cDNA_position: 2693
        CDS_position: 2678
        Protein_position: 893
        Exon_number: 14/18
        Codon_change: tTa/tCa
        Amino_acid_change: L/S
      C05D12.3c.3 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: C05D12.3c.3:c.2678T>C
        HGVSp: CE39469:p.Leu893Ser
        cDNA_position: 2678
        CDS_position: 2678
        Protein_position: 893
        Exon_number: 13/18
        Codon_change: tTa/tCa
        Amino_acid_change: L/S
      C05D12.3c.2 VEP_consequence: missense_variant
        VEP_impact: MODERATE
        HGVSc: C05D12.3c.2:c.2678T>C
        HGVSp: CE39469:p.Leu893Ser
        cDNA_position: 2692
        CDS_position: 2678
        Protein_position: 893
        Exon_number: 14/17
        Codon_change: tTa/tCa
        Amino_acid_change: L/S
  Reference: WBPaper00037807
  Method: WGS_De_Bono