WormBase Tree Display for Variation: WBVar01311922
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| WBVar01311922 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01311922 | |||||
| Other_name | cewivar00485877 | ||||||
| C05D12.3c.2:c.369A>G | |||||||
| C05D12.3c.1:c.369A>G | |||||||
| CE36974:p.Gln123= | |||||||
| C05D12.3a.1:c.369A>G | |||||||
| C05D12.3c.3:c.369A>G | |||||||
| CE39469:p.Gln123= | |||||||
| HGVSg | CHROMOSOME_II:g.11426594A>G | ||||||
| Sequence_details | SMap | S_parent | Sequence | C05D12 | |||
| Flanking_sequences | CTAGAAACCCTGCGAAGTAATTTTAAAGGAATGGTGAATTCAATTACTCA | AATTGGAATAAAAATAAGGAATCTGAAAATTGGATTGCCAACTTTATGTT | |||||
| Mapping_target | C05D12 | ||||||
| Type_of_mutation | Substitution | a | G | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain (20) | |||||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| WGS_Andersen | |||||||
| DB_info | Database | dbSNP_ss | ss | 539169009 | |||
| History | Acquires_merge | WBVar01439989 | |||||
| Status | Live | ||||||
| Affects | Gene | WBGene00014666 | |||||
| Transcript | C05D12.3a.1 | VEP_consequence | synonymous_variant | ||||
| VEP_impact | LOW | ||||||
| HGVSc | C05D12.3a.1:c.369A>G | ||||||
| HGVSp | CE36974:p.Gln123= | ||||||
| cDNA_position | 381 | ||||||
| CDS_position | 369 | ||||||
| Protein_position | 123 | ||||||
| Exon_number | 4/16 | ||||||
| Codon_change | caA/caG | ||||||
| Amino_acid_change | Q | ||||||
| C05D12.3c.1 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | ||||||
| HGVSc | C05D12.3c.1:c.369A>G | ||||||
| HGVSp | CE39469:p.Gln123= | ||||||
| cDNA_position | 384 | ||||||
| CDS_position | 369 | ||||||
| Protein_position | 123 | ||||||
| Exon_number | 4/18 | ||||||
| Codon_change | caA/caG | ||||||
| Amino_acid_change | Q | ||||||
| C05D12.3c.3 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | ||||||
| HGVSc | C05D12.3c.3:c.369A>G | ||||||
| HGVSp | CE39469:p.Gln123= | ||||||
| cDNA_position | 369 | ||||||
| CDS_position | 369 | ||||||
| Protein_position | 123 | ||||||
| Exon_number | 3/18 | ||||||
| Codon_change | caA/caG | ||||||
| Amino_acid_change | Q | ||||||
| C05D12.3c.2 | VEP_consequence | synonymous_variant | |||||
| VEP_impact | LOW | ||||||
| HGVSc | C05D12.3c.2:c.369A>G | ||||||
| HGVSp | CE39469:p.Gln123= | ||||||
| cDNA_position | 383 | ||||||
| CDS_position | 369 | ||||||
| Protein_position | 123 | ||||||
| Exon_number | 4/17 | ||||||
| Codon_change | caA/caG | ||||||
| Amino_acid_change | Q | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
