WormBase Tree Display for Variation: WBVar01305734
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| WBVar01305734 | Evidence | Paper_evidence | WBPaper00037807 | ||||
|---|---|---|---|---|---|---|---|
| Name | Public_name | WBVar01305734 | |||||
| Other_name | cewivar00466400 | ||||||
| B0304.1b.1:c.433C>T | |||||||
| B0304.1a.2:c.433C>T | |||||||
| CE30067:p.Pro145Ser | |||||||
| B0304.1a.1:c.433C>T | |||||||
| B0304.1c.1:c.433C>T | |||||||
| CE31766:p.Pro145Ser | |||||||
| CE02423:p.Pro145Ser | |||||||
| HGVSg | CHROMOSOME_II:g.4521211C>T | ||||||
| Sequence_details | SMap | S_parent | Sequence | B0304 | |||
| Flanking_sequences | AACATGAGGACACTACAACGTCTACTGCTGGCGGAGCCGGTGTCGGTGGA | CGCGGAGAACCAAATGTGAGAGATTTTTAGAATTATTAGACCCTCAAATT | |||||
| Mapping_target | B0304 | ||||||
| Type_of_mutation | Substitution | c | T | Paper_evidence | WBPaper00037807 | ||
| SeqStatus | Sequenced | ||||||
| Variation_type | SNP | ||||||
| Natural_variant | |||||||
| Origin | Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | ||||
| WGS_De_Bono | |||||||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||||
| Analysis | WGS_De_Bono | ||||||
| Million_mutation_project_reanalysis | |||||||
| DB_info | Database | dbSNP_ss | ss | 539163441 | |||
| Status | Live | ||||||
| Affects | Gene | WBGene00001948 | |||||
| Transcript | B0304.1a.1 | VEP_consequence | missense_variant | ||||
| VEP_impact | MODERATE | ||||||
| HGVSc | B0304.1a.1:c.433C>T | ||||||
| HGVSp | CE31766:p.Pro145Ser | ||||||
| cDNA_position | 437 | ||||||
| CDS_position | 433 | ||||||
| Protein_position | 145 | ||||||
| Exon_number | 3/8 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| B0304.1c.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | B0304.1c.1:c.433C>T | ||||||
| HGVSp | CE30067:p.Pro145Ser | ||||||
| cDNA_position | 439 | ||||||
| CDS_position | 433 | ||||||
| Protein_position | 145 | ||||||
| Exon_number | 3/8 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| B0304.1b.1 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | B0304.1b.1:c.433C>T | ||||||
| HGVSp | CE02423:p.Pro145Ser | ||||||
| cDNA_position | 435 | ||||||
| CDS_position | 433 | ||||||
| Protein_position | 145 | ||||||
| Exon_number | 3/8 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| B0304.1a.2 | VEP_consequence | missense_variant | |||||
| VEP_impact | MODERATE | ||||||
| HGVSc | B0304.1a.2:c.433C>T | ||||||
| HGVSp | CE31766:p.Pro145Ser | ||||||
| cDNA_position | 537 | ||||||
| CDS_position | 433 | ||||||
| Protein_position | 145 | ||||||
| Exon_number | 4/9 | ||||||
| Codon_change | Ccg/Tcg | ||||||
| Amino_acid_change | P/S | ||||||
| Reference | WBPaper00037807 | ||||||
| Method | WGS_De_Bono |
